The primary aim of the research is to investigate the accumulation and distribution of organic material [OM] in saline shallow lacustrine sediments. This study focuses on the OM parameters of sediments at two areas with different hydrology, land use, and vegetation cover. The study area is located at the Fehér Lake, Szeged (Hungary). The studied salt-affected lake system has been under intensive fish breeding from 1970. Sampling was made during the spring of 2007. In case of the profiles a 4 m deep 10 cm diameter sediment core was extracted. The OM data were measured with Rock-Eval pyrolysis, and the proportion of different OM groups was determined by the mathematical deconvolution of Rock-Eval pyrograms. It is showed that there are significant differences in OM distribution and characteristics if the different study sites are compared. In case of both profiles similar changes can be detected in the origin, quantitative and qualitative parameters of OM at depths of 15, 30, and 65-70 cm, which proves that the two sites belonged to the same depositional system, and similar changes affected them during sediment formation. Although both profiles have the same depositional environment, significant difference can be seen between the profiles. The profile 1 used to be located in coastal natural territory till 1970 and the profile 2 represents a constant water-irrigated fields. The fluctuation of F1+F2 and F3 values in Profile 1 suggests that the OM content of the marginal territory (both in its natural and present state) is determined by the alternation of dry and wet periods, sometimes with a high algae production in slack waters. Based on the quality parameters of OM, dry and wet accumulation periods can be separated, and signs of human influence can also be identified.